Expert Details

Genome (and Transcriptome) Sequencing and Parasitology

ID: 729418 United Kingdom

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Expert has spent the past 10 years leading pathogen genome projects at the Sanger Institute. He has more than 75 publications (including 15 genome papers). He has driven data standards in genome research, for instance by developing technology for genome improvement and computational tools for curation.

Expert was originally trained in Biochemistry and then completed a two-year postdoctoral fellowship on Trypanosoma brucei at Rockefeller University, before joining the Sanger Institute as a senior computer biologist in 2000, initially to work on annotating and analysing the genomes of P. falciparum and T. brucei. His current research concerns the breadth of parasites, particularly the medically important Apicomplexan and Kinetoplastid protozoa, which include malaria parasites and trypanosomes, respectively, and parasitic helminths.

Comparative genomics techniques are used, firmly anchored around one or two high quality, and manually reviewed genomes to place biological phenomena in a genomic context. In 2008, he joined the Sanger Institute faculty to lead a programme in the genomics of Neglected Tropical Disease parasites, which include parasitic helminths such as Schistosomes, tapeworms, roundworms, hookworms, threadworms and whipworms.


Education

Year Degree Subject Institution
Year: 1998 Degree: PhD Subject: Molecular Parasitology (Malaria) Institution: London School of Hygiene and Tropical Medicine
Year: 1994 Degree: BSc Hons Subject: Biochemistry Institution: University of Manchester

Work History

Years Employer Title Department
Years: 2008 to Present Employer: Undisclosed Title: Undisclosed Department: Undisclosed
Responsibilities:
He leads a programme in the genomics of neglected tropical disease parasites, including helminths such as Schistomosomes, tapeworms, roundworms, hookworms, threadworms and whipworms
Years Employer Title Department
Years: 2005 to 2008 Employer: Undisclosed Title: Project Manager Department: Undisclosed
Responsibilities:
He was responsible for and managed all eukaryotic pathogen genome sequencing projects at the Institute
Years Employer Title Department
Years: 2000 to 2005 Employer: Undisclosed Title: Senior Computer Biologist Department: Undisclosed
Responsibilities:
He was responsible for annotating and the analysing the genomes of major parasitic protozoa
Years Employer Title Department
Years: 1998 to 2000 Employer: Rockefeller University Title: Undisclosed Department: Undisclosed
Responsibilities:
He carried out a research project on the telomeres of African trypanosomes

Fields of Expertise

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